BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036A10SP1|AL430161
(920 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1696 819 0.0
3x_Contig1643 153 7e-37
>3x_Contig1696
Length = 16725
Score = 819 bits (413), Expect = 0.0
Identities = 413/413 (100%)
Strand = Plus / Plus
Query: 1 tccagaagaccacaatcctttcccagattacccaatgatgagagataccgtttacgtgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16313 tccagaagaccacaatcctttcccagattacccaatgatgagagataccgtttacgtgaa 16372
Query: 61 tccacaatccagtatagtcttgcgtttcaaagccgacaatccaggtgtttggttcttcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16373 tccacaatccagtatagtcttgcgtttcaaagccgacaatccaggtgtttggttcttcca 16432
Query: 121 ttgtcacattgaatggcatttgaagcaaggtcttgcattgttgttgattgaagcaccaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16433 ttgtcacattgaatggcatttgaagcaaggtcttgcattgttgttgattgaagcaccaga 16492
Query: 181 agaaatgcaaaacactgaatcccaacaattgactgataaccacaagcaagtctgcgaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16493 agaaatgcaaaacactgaatcccaacaattgactgataaccacaagcaagtctgcgaaaa 16552
Query: 241 tgtcggtctttcttgggaaggtaacgctgcaggaaacactaacgatttcttggatctagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16553 tgtcggtctttcttgggaaggtaacgctgcaggaaacactaacgatttcttggatctagt 16612
Query: 301 cggtcaaaacgttcaagtggctaacattccagatggtttcactgctaagggtattgttgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16613 cggtcaaaacgttcaagtggctaacattccagatggtttcactgctaagggtattgttgc 16672
Query: 361 tatgaccttttcctgtctagcaggtgttcttggtttaatttccctatcaacct 413
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16673 tatgaccttttcctgtctagcaggtgttcttggtttaatttccctatcaacct 16725
>3x_Contig1643
Length = 10865
Score = 153 bits (77), Expect = 7e-37
Identities = 84/85 (98%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 836 cattgattaacctgaaacgatttatcttctatccaataaactcttttttggatatttcag 895
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 10849 cattgattaacctgaaacgatttatcttctatccaataaactc-tttttggatatttcag 10791
Query: 896 tataaaatttcagtattgtcataca 920
|||||||||||||||||||||||||
Sbjct: 10790 tataaaatttcagtattgtcataca 10766
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7548
Number of Sequences: 1807
Number of extensions: 7548
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 2
length of query: 920
length of database: 10,358,551
effective HSP length: 16
effective length of query: 904
effective length of database: 10,329,639
effective search space: 9337993656
effective search space used: 9337993656
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)